Study of Genetic Diversity of Strongyloides stercoralis for Confirmation of Parasite Origins and Correlation with Patients Data
Keywords:
S. stercoralis, Phylogenetic tree, ITS1 gene, Neighbor-joining (NJ), ClusterAbstract
Strongyloidiasis, which is caused by Strongyloides stercora/is, affects 100-300 million people worldwide. Correlations of phylogenetic tree of S.stercora/is and patient data, including residential area, physician diagnosis and laboratory results are useful for epidemiological study. However, there is presently no report on such study in Thailand. In this research, sixteen stool samples were collected from Vajira Hospital and Ratchaburi Hospital. Then, ITS1 region of rDNA gene as target DNA was amplified by polymerase chain reaction (PCR). Phylogenetic tree was constructed. Patient history, diagnosis and laboratory results (complete blood count testing) were collected for analyzing correlations with phylogenetic tree groups. According to the phylogenetic tree S. stercora/is could be divided into 12 clusters (clusters I-XII). The percentage of Bangkok patients, patients from other provinces and patients from Ratchaburi province were 43.7, 25.0 and 31.3, respectively. Cluster X was found in more than one sources with most patients (75.0%) in the age range60 years old and usually found associated with unstable angina, gastrointestinal symptoms, pulmonary symptoms and immunocompromised conditions. Clusters V, IX, X and XI were found in the patients> 60 years of age. Symptoms of diseases of60 years patients and over age groups had no statistically significant difference
(p-value = 0.59; p > 0.05). Cluster X and XI caused leukocytosis. Cluster IV, VI, IX, X and XI caused neutrophilia (5 cases). Cluster III, V, VII and XII caused eosinophilia (4 cases). Cluster VII was obtained from HIV patients with bacteremia infections. Other laboratory results
correlated with the diseases found in HIV patients infected with S. stercoralis. In conclusion, the phylogenetic tree can be used to divide S. stercoralis into 12 clusters. This research is useful in epidemiology for cluster classification of S. stercora/is, confirming the source of infection and correlation of patient data and clusters.