Partial Sequence of rbcL Genes of Five Medicinal Plants in Chanthaburi Province

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Chawanrat Somnuek
Phisut Kanboon

Abstract

Five rare medicinal plants in a group of “Chan Tang Ha” (locally known in Thai as Chan-Chamod, Chan-Thet, Chan-Thana, Chan-Daeng and Chan-Khao) found in Chanthaburi province were collected for this study. DNAs of plant leaves were extracted and rbcL (ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit) genes were amplified using the PCR technique. The PCR products were purified and their nucleotide sequences were compared with all other sequences in NCBI BLAST databases (http://www.ncbi.nlm.nih.gov/BLAST/). The results found that all samples could have their rbcL genes used for DNA amplification. Nucleotide sequences and morphological characteristics of the samples were considered. Chan-Chamod, Chan-Thet and Chan-Thana showed similarity with Aglaia sp. (99.08%), Myristica fragrans (99.89%) and Tarenna buruensis (98.69%) respectively. Two samples of Chan-Daeng were identified as Chanpha or Dracaena cambodiana (99.48%) and Knema sp. (99.43%). Finally, the morphology of Chan-Khao might be similar to that of Luehea paniculate (98.89%).

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References

Sapakhun S, Chaleanlap K, Boonreung S, Panbamrung P, Kiedkangvanklai A, Ananwarapong P, Chamniensri

C, Klinthong N. The study of biodiversity of mangrove forests in the Pak Nam Welu area, Khlung District, Chanthaburi Province. In research report of Rajamangala University of Technology Krungthep. Bangkok: 2007. (in Thai)

National Parks Research Center. Biodiversity of forests and wildlife in the ecological corridor between Khao

Khitchakut national park and Khao Soi Dao wildlife sanctuary, Chanthaburi province. In national park research

report 13(4). National Park Innovation and Research Center, Phetchaburi Province, Phetchaburi: 2016. p.

-30. (in Thai)

Notification of the Ministry of Public Health. Management plan for protecting herbs in Phu Pha Kood conservation area, Mukdahan province: According to the protection and promotion of Thai traditional medicine knowledge protection and promotion act traditional Thai medicine wisdom 1999. Ministry of Public Health, Bangkok: 2008. (in Thai)

Database of Plants in the Project due to the Initiative of the Chaipattana Foundation. Gold apple. [Internet]. n.d. [cited 2020 July 1]; Available from: http://punmai.chaipat.or.th/view-detail.php?region=2&pid=21&id=89. (in Thai)

Srisopon S, Burana-osot J, Sotanaphun U. Identification of Chan-Chamot by Thin Layer Chromatography. Thai

Bulletin of Pharmaceutical Sciences. 2016;11(1):47-57. (in Thai)

Medthai. Chan Thet: 54 properties and benefits of Chan Thet and Look Chan. [Internet]. 2017 [cited 2021 March 4]: Available from: https://medthai.com/จันทน์เทศ (in Thai)

Picheansoonthon C, Manmas C, Jeerawong V. Description of the Phra Narai Vishnu in honor of the 72nd Anniversary of the Maharaja, December 5, 1999. Bangkok: Amarin Printing and Publishing; 2015. (in Thai).

Gardner S, Sitthisoontorn P, Chayamarit K. Forest trees of Southern Thailand. Bangkok: Kobfire printing project; 2016. (in Thai).

Plunkett GM, Soltis DE, Soltis PS. Clarification of the relationship between Apiaceae and Araliaceae based

on matK and rbcL sequence data. American Journal of Botany. 1997;84:565-80.

Hollingsworth PM, Forrest LL, Spouge JL, Hajibabaei M, Ratnasingham S, van der Bank M, Chase MW, Cowan RS, Erickson DL, Fazekas AJ, Graham SW, James KE, Kim KJ, Kress WJ, Schneider H, van Alphen Stahl J, Barrett

SC, van den Berg C, Bogarin D, Burgess KS, Cameron KM, Carine M, Chacón J, Clark A, Clarkson JJ, Conrad

F, Devey DS, Ford CS, Hedderson TA, Hollingsworth ML, Husband BC, Kelly LJ, Kesanakurti PR, Kim JS, Kim

YD, Lahaye R, Lee HL, Long DG, Madriñán S, Maurin O, Meusnier I, Newmaster SG, Park CW, Percy DM, Petersen

G, Richardson JE, Salazar GA, Savolainen V, Seberg O, Wilkinson MJ, Yi DK, Little DP. A DNA barcode for land

plants. 2009;PNAS106(31):12794-7.

Monkhrang P, Chaveerach A, Tanee T, Sudmoon R. DNA Barcode for Identification of Processes Medicinal Senna species. KKU Research Journal. 2013;13(2):18-30. (in Thai)

Rozen S, Skaletsky H. Primer3 on the WWW for general users and for biologist programmers, In: Krawetz S,

Misener S, editors. Bioinformatics methods and protocols: methods in molecular biology. Totowa, New Jersey:

Humana Press; 2000.

Committee for Thai Herbs Textbook. Chan Thang Song. Journal of Thai Traditional & Alternative Medicine.

;15(1):104-16.

Forest Herbarium. Concise encyclopedia of plants in Thailand. [Internet]. 2016. [cited 2019 May 30]; Available

from: https://www.dnp.go.th/botany/detail.aspx?words=จันทน์ชะมด&typeword=group (in Thai)

BGO Plant Database, The Botanical Garden Organization. Medicinal plants database. [Internet]. 2011 [cited

January 12]; Available from: http://www.qsbg.org/Database/plantdb/mdp/medicinal-specimen.asp?id=729

(in Thai)

Medthai. Chan Pha: 26 Properties and benefits of Chan Pha. [Internet]. 2017 [cited 2020 April 7]: Available from: https://medthai.com/จันทน์ผา/ (in Thai)

Plant Genetic Conservation Project Under The Royal initiative of Her Royal Highness Princess Maha Chakri

Sirindhorn. Plant data. [Internet]. n.d. [cited 2020 May 10]: Available from: http://www.rspg.or.th/plants_data/

palace/chitralada/cld6-2_092.htm (in Thai)

Srisopon S, Burana-osot J, Sotanaphun U. Botanical identification of Chan-Khao and Chan-Thana by Thin-

Layer Chromatography. Thai Pharmaceutical and Health Science Journal. 2015;10(1):19-24. (in Thai)

Smitinand T. Thai plant names (botanical names–vernacular names). Forest Herbarium, Royal Forest Department, Bangkok: 1980. (in Thai)

Picheansoonthon C, Wichai N. The botanical source of Chan-Deang. The Journal of the Royal Society of Thailand. 2004;29(1):25-35. (in Thai)

Thanananta N, Sumrith J, Thanananta T. Analysis of genetic relationship of colored rice cultivars using DNA

sequences of rbcL and rpoC1 genes. Thai Science and Technology Journal. 2014;22(5)(Special Issue):674-82.

(in Thai)

Krishnamurthy K, Francis RA. A critical review on the utility of DNA barcoding in biodiversity conservation.

Biodiversity and Conservation. 2012;21(8):1901-19.